API Reference
=============

The API reference below is generated automatically from the public
``spectral_unmixing`` package and its docstrings.


Top-level package
-----------------

.. automodule:: spectral_unmixing
   :show-inheritance:


Public API overview
-------------------

.. currentmodule:: spectral_unmixing

.. autosummary::
   :toctree: generated

   unmix
   unmix_picasso
   unmix_ch0_from_ch1
   estimate_alpha_from_volume
   estimate_picasso_unmixing_matrix_from_volume
   prepare_source_target_for_alpha
   make_alpha_mask
   mutual_information_1d
   apply_filters
   match_histograms_across_time
   max_z_project
   register_stack
   correct_intra_stack_z_drift
   show_unmixed_channels_in_napari
   show_all_channels_in_napari
   convert_time_encoded_stack_to_channel_stack
   report_path_from_output_path
   DEFAULT_COLORMAPS